Prof. Dr. Burkhard Morgenstern
Universität Göttingen
Institut für Mikrobiologie und Genetik
Abteilung für Bioinformatik
Goldschmidtstr. 1, Raum 2.167
37077 Göttingen
Germany
My spam-protected E-mail is:
bmorgen AT gwdg DOT de
| Phone: | +49 551 39-14628 |
| Secretary: | +49 551 39-14966 |
Follow @burkhard_mstern
Me on Twitter
Follow @gioinfogoe
The Göttingen Bioinformatics community on Twitter
Prot-SpaM, Multi-SpaM, Filtered Spaced-Word Matches, Slope-SpaM, kmacs and rasbhari.
Visit our journal: Algorithms for Molecular Biology
Publications (for citations etc., see ResearcherID, Research Gate or Google Scholar)
- Selected recent papers:
- B. Morgenstern (2019)
Der Metrik-Wahn
Laborjournal 7-8, 22-25 -
A. Zielezinski, H.Z. Girgis, G. Bernard, C.-A. Leimeister, K. Tang,
T. Dencker, A.K. Lau, S. Röhling, J. Choi, M.S. Waterman, M. Comin,
S.-H. Kim, S. Vinga, J.S. Almeida, C.X. Chan, B. James, F. Sun,
B. Morgenstern, W.M. Karlowski (2019)
Benchmarking of alignment-free sequence comparison methods
Genome Biology 20, 144
- A.K. Lau, C.-A. Leimeister, S. Dörrer, C. Bleidorn,
B. Morgenstern (2019)
Read-SpaM: assembly-free and alignment-free comparison of bacterial genomes with low sequencing coverage
bioRxiv, doi:10.1101/550632v4
- S. Röhling, T. Dencker, B. Morgenstern (2019)
The number of k-mer matches between two DNA sequences as a function of k
bioRxiv, doi:10.1101/527515v2
- B. Morgenstern (2019)
Fake scientists on editorial boards can significantly enhance the visibility of junk journals.
In: Mario Biagioli and Alexandra Lippman (Eds.)
Metrics and Misconduct: New Ecologies of Academic Research. MIT Press, to appear.
- C.-A. Leimeister, T. Dencker, B. Morgenstern (2019)
Accurate multiple alignment of distantly related genome sequences using Filtered Spaced Word Matches as anchor points
Bioinformatics 35, 211-218 -
C.-A. Leimeister, J. Schellhorn, S. Dörrer, M. Gerth, C. Bleidorn,
B. Morgenstern (2019)
Prot-SpaM: Fast alignment-free phylogeny reconstruction based on whole-proteome sequences
GigaScience 8, giy148.
- T. Dencker, C.-A. Leimeister, M. Gerth, C. Bleidorn, S. Snir, B. Morgenstern (2018)
Multi-SpaM: a Maximum-Likelihood approach to Phylogeny reconstruction based on Multiple Spaced-Word Matches
In: M. Blanchette, A. Ouangraoua (Eds.),
Comparative Genomics, LNBI 11183, Springer, Proc. RECOMB-CG 2018, pp. 227-241.
Preprint: arXiv:1803.09222 [q-bio.PE]
-
B. Morgenstern, S. Schöbel, C.-A. Leimeister (2017)
Phylogeny reconstruction based on the length distribution of k-mismatch common substrings
Algorithms for Molecular Biology 12, 27 - C.-A. Leimeister, S. Sohrabi-Jahromi, B. Morgenstern (2017)
Fast and Accurate Phylogeny Reconstruction using Filtered Spaced-Word Matches
Bioinformatics 33, 971-979 - L. Hahn, C.-A. Leimeister, R. Ounit, S. Lonardi, B. Morgenstern (2016)
rasbhari: optimizing spaced seeds for database searching, read mapping and alignment-free sequence comparison
PLOS Computational Biology 12, e1005107
-
B. Morgenstern, B. Zhu, S. Horwege, C.-A Leimeister (2015)
Estimating evolutionary distances between genomic sequences from spaced-word matches
Algorithms for Molecular Biology 10, 5
- B. Morgenstern (2019)
- B.M. Full publication list
- Department publication list
Short CV
Created by Burkhard Morgenstern.
Last modified: July 2019